When I made the jaws, I set them up on the mill and made a light mark with a center drill exactly in the center of the jaws. You can see it in this picture...
View attachment 415493
When I set up on the horizontal mill to make the diagonal cuts, I started by using my calibrated eyeball to center the cutter on that mark... then offset the cutter by one half the distance (0.0625") between the diagonal cuts. I zeroed the cutter there, then worked in both directions, making the cuts 0.125" apart.
I then rotated the vise to the same angle the other direction, re-centered the cutter on the mark, offset 0.0625", zeroed the cutter, and made the cuts the other direction.
This made the diagonal cuts line up very closely on both jaws... they are close, but not perfect.
-Bear