I got a package, and it did not disappoint! Here is a quick update, and some photos, I've got a ton more photos and a detailed update coming this weekend, but for now here's the short version.
The cross slide looks like it will work out great, but I can't work on it right now because I have an awkward non-round part currently dialed in on the 4jaw.
My spindle does have the the pin in the location of the spacer and the bearing I got does not have a slot/keyway for it. I did a bit of looking around the internet for more info about the bearing (while THM was down). Some people say that Atlas sold them with either a spacer/plain-bearing or the ball thrust bearing. Most convincing part is the pic of their spacer that is identical to mine.
https://groups.io/g/atlas-craftsman/topic/how_do_you_oil_the_thrust/11253514?p=Created,,,20,1,0,0
The bearing is 1/8" thicker than my original spacer, but I don't feel like shoving the spindle up 1/8" will be a problem, aside from the fact that the detent in spindle is where it is, so the cone pulley will also be pushed forward. I think it is going to cause a interference with index pin that goes into the face of the pulley, so I'll probably have to remove it. Other than that I just drilled a detent into the counter shaft for the cone pulley there, because the flat was all marred up and the set screw wasn't holding well. So the pulleys will be 1/8" out of alignment. I'll see how bad it looks when I get it together, and I might have to dill another detent further down rotated either 90 or 180 degrees from the current flat/detent.
Either way let me know what you guys think the best way to get the ball bearing onto my spindle is. I'm determined to make it work, and I would really like to not have to saw/grind off the pin. A method for pulling it out would be great, I tried grabbing it with pliers and it is pretty soft. Other than that maybe grinding a slot in the bearing, but that just feels wrong although without some better options that's where I'm leaning. Open to ideas, let me know!